halophFGD

Basic Information

Locus ID: gene:TRIDC6AG060680

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Short Name: EFR

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
6A	616936300	616939947	-	gene:TRIDC6AG060680

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.29	114,555.14 Da	41.17	109.79	0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00560	Leucine Rich Repeat	130	151	0.11	IPR001611
Pfam	PF08263	Leucine rich repeat N-terminal domain	32	72	7.6E-9	IPR013210
Pfam	PF00069	Protein kinase domain	833	1046	2.3E-37	IPR000719
Pfam	PF00560	Leucine Rich Repeat	473	495	1.5	IPR001611
Pfam	PF00560	Leucine Rich Repeat	691	709	1.5	IPR001611
Pfam	PF00560	Leucine Rich Repeat	201	223	1.1	IPR001611
SUPERFAMILY	SSF52058	L domain-like	32	321	2.07E-60	-
SUPERFAMILY	SSF52058	L domain-like	265	457	1.11E-32	-
SUPERFAMILY	SSF52058	L domain-like	503	751	1.25E-48	-
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	811	1046	2.83E-60	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	813	914	2.6E-22	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	152	223	1.1E-19	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	33	151	1.1E-29	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	915	1055	6.4E-40	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	465	761	9.8E-84	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	224	464	1.4E-58	IPR032675
SMART	SM00369	LRR_typ_2	640	664	180.0	IPR003591
SMART	SM00369	LRR_typ_2	343	367	11.0	IPR003591
SMART	SM00220	serkin_6	831	1051	6.2E-13	IPR000719
SMART	SM00369	LRR_typ_2	127	151	330.0	IPR003591
SMART	SM00369	LRR_typ_2	544	568	72.0	IPR003591
SMART	SM00369	LRR_typ_2	688	712	31.0	IPR003591
SMART	SM00369	LRR_typ_2	472	494	200.0	IPR003591
SMART	SM00369	LRR_typ_2	199	223	15.0	IPR003591
SMART	SM00369	LRR_typ_2	294	318	120.0	IPR003591
SMART	SM00365	LRR_sd22_2	294	320	480.0	-
SMART	SM00365	LRR_sd22_2	688	717	180.0	-
SMART	SM00365	LRR_sd22_2	199	231	15.0	-
SMART	SM00365	LRR_sd22_2	471	497	210.0	-
SMART	SM00369	LRR_typ_2	247	272	69.0	IPR003591
ProSiteProfiles	PS50011	Protein kinase domain profile.	831	1056	34.378849	IPR000719
ProSiteProfiles	PS51450	Leucine-rich repeat profile.	690	712	7.149804	IPR001611
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	837	862	-	IPR017441
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	963	975	-	IPR008271
PRINTS	PR00019	Leucine-rich repeat signature	688	701	6.4E-5	-
PRINTS	PR00019	Leucine-rich repeat signature	202	215	6.4E-5	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G47110.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_037446412.1	probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum dicoccoides]
Swiss-Prot	Q9SD62	Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana OX=3702 GN=At3g47110 PE=3 SV=1
TrEMBL	A0A3B6PVV9	Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC6AG060680.