Basic Information
Locus ID:
gene:TRIDC6AG060300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 615537987 | 615542037 | - | gene:TRIDC6AG060300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 82,204.62 Da | 37.39 | 89.86 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 355 | 391 | 5.09192E-7 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 467 | 728 | 2.2E-43 | IPR001245 |
| Pfam | PF07645 | Calcium-binding EGF domain | 355 | 397 | 5.5E-7 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 48 | 85 | 7.2E-9 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 458 | 732 | 1.28E-66 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 352 | 398 | 5.86E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 314 | 398 | 5.7E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 540 | 741 | 1.8E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 447 | 538 | 5.6E-22 | - |
| SMART | SM00220 | serkin_6 | 464 | 730 | 8.5E-30 | IPR000719 |
| SMART | SM00181 | egf_5 | 305 | 354 | 180.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 355 | 398 | 6.0E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 358 | 398 | 5.2E-4 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 355 | 398 | 10.95974 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 464 | 730 | 36.018391 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 355 | 382 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 583 | 595 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 470 | 492 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 373 | 384 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_037449151.1 | wall-associated receptor kinase 4-like [Triticum dicoccoides] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6QNR3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG060300.