Basic Information
Locus ID:
gene:TRIDC6AG059480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 611909613 | 611910200 | + | gene:TRIDC6AG059480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 20,169.69 Da | 76.83 | 83.28 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 113 | 163 | 7.3E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 110 | 168 | 1.12E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 168 | 2.2E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 114 | 162 | 7.2E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 114 | 163 | 12.592549 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 195 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66070.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_020194506.1 | RING-H2 finger protein ATL8-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9FKX5 | NEP1-interacting protein-like 1 OS=Arabidopsis thaliana OX=3702 GN=ATL27 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8I6Z560 | RING-type E3 ubiquitin transferase OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG059480.