Basic Information
Locus ID:
gene:TRIDC6AG059130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 610822718 | 610826730 | - | gene:TRIDC6AG059130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 93,172.25 Da | 40.85 | 86.68 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 532 | 796 | 2.83829E-96 | - |
| CDD | cd01098 | PAN_AP_plant | 363 | 456 | 1.33915E-11 | - |
| CDD | cd00028 | B_lectin | 102 | 187 | 4.96062E-23 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 374 | 431 | 9.0E-7 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 115 | 197 | 2.0E-18 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 529 | 791 | 8.8E-52 | IPR000719 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 112 | 240 | 1.44E-26 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 512 | 794 | 1.62E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 490 | 599 | 1.2E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 600 | 811 | 6.9E-61 | - |
| Gene3D | G3DSA:2.90.10.30 | - | 98 | 238 | 2.6E-17 | - |
| SMART | SM00108 | blect_4 | 81 | 187 | 6.5E-13 | IPR001480 |
| SMART | SM00220 | serkin_6 | 526 | 798 | 1.4E-39 | IPR000719 |
| SMART | SM00473 | ntp_6 | 366 | 449 | 0.0014 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 38 | 827 | 9.3E-201 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 366 | 450 | 8.115173 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 526 | 798 | 39.396416 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 56 | 185 | 15.087686 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 532 | 553 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 645 | 657 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 0 |
| RefSeq | XP_037449075.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Triticum dicoccoides] | 0 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PSS9 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG059130.