Basic Information
Locus ID:
gene:TRIDC6AG059120
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 610813021 | 610816471 | - | gene:TRIDC6AG059120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 39,918.01 Da | 48.66 | 89.69 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09617 | Peptidase_C12_UCH37_BAP1 | 22 | 239 | 3.11326E-129 | - |
| Pfam | PF18031 | Ubiquitin carboxyl-terminal hydrolases | 294 | 334 | 5.5E-20 | IPR041507 |
| Pfam | PF01088 | Ubiquitin carboxyl-terminal hydrolase, family 1 | 22 | 225 | 4.2E-68 | IPR001578 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 21 | 242 | 1.86E-68 | IPR038765 |
| Gene3D | G3DSA:3.40.532.10 | - | 14 | 243 | 1.0E-82 | IPR036959 |
| Gene3D | G3DSA:1.20.58.860 | - | 244 | 329 | 1.2E-24 | - |
| PIRSF | PIRSF038120 | Uch | 17 | 355 | 9.6E-128 | IPR017390 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 95 | 112 | 2.4E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 171 | 182 | 2.4E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 24 | 41 | 2.4E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 187 | 197 | 2.4E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 59 | 71 | 2.4E-10 | IPR001578 |
| Coils | Coil | Coil | 237 | 271 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65650.1 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1. | 0 |
| RefSeq | XP_037449073.1 | ubiquitin carboxyl-terminal hydrolase 2-like [Triticum dicoccoides] | 0 |
| O04482 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UCH2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453Q436 | Ubiquitin carboxyl-terminal hydrolase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG059120.