Basic Information
Locus ID:
gene:TRIDC6AG058550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 609059924 | 609060913 | + | gene:TRIDC6AG058550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 21,846.65 Da | 53.26 | 92.31 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 115 | 158 | 1.35312E-16 | - |
| Pfam | PF13639 | Ring finger domain | 115 | 158 | 6.5E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 115 | 170 | 1.26E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 88 | 165 | 2.7E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 116 | 157 | 2.5E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 116 | 158 | 11.913911 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044405114.1 | RING-H2 finger protein ATL1-like [Triticum aestivum] | 0 |
| P93823 | RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1 | 0 | |
| TrEMBL | M7ZLQ1 | RING-type E3 ubiquitin transferase OS=Triticum urartu OX=4572 GN=TRIUR3_17529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG058550.