Basic Information
Locus ID:
gene:TRIDC6AG058430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
receptor protein kinase ZmPK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 608533899 | 608536328 | - | gene:TRIDC6AG058430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 90,529.75 Da | 35.58 | 89.84 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 324 | 405 | 7.85187E-20 | - |
| CDD | cd14066 | STKc_IRAK | 525 | 798 | 1.20537E-84 | - |
| CDD | cd00028 | B_lectin | 42 | 149 | 3.10007E-20 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 74 | 163 | 2.2E-19 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 522 | 796 | 9.1E-56 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 328 | 380 | 7.5E-6 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 245 | 309 | 2.8E-8 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 501 | 798 | 1.48E-73 | IPR011009 |
| SUPERFAMILY | SSF57414 | Hairpin loop containing domain-like | 334 | 381 | 5.49E-5 | - |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 62 | 204 | 2.49E-26 | IPR036426 |
| Gene3D | G3DSA:3.50.4.10 | Hepatocyte Growth Factor | 331 | 400 | 8.2E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 594 | 808 | 4.4E-58 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 21 | 148 | 1.5E-17 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 494 | 593 | 6.7E-27 | - |
| SMART | SM00108 | blect_4 | 33 | 149 | 1.0E-19 | IPR001480 |
| SMART | SM00220 | serkin_6 | 519 | 800 | 2.0E-34 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 4 | 808 | 2.2E-211 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 27 | 147 | 15.151623 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 519 | 801 | 38.20916 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 328 | 408 | 8.600117 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 637 | 649 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 525 | 547 | - | IPR017441 |
| Coils | Coil | Coil | 801 | 809 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34300.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_037445297.1 | putative receptor protein kinase ZmPK1 [Triticum dicoccoides] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6NXU2 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG058430.