Basic Information
Locus ID:
gene:TRIDC6AG056080
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 598449034 | 598451524 | - | gene:TRIDC6AG056080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.00 | 80,425.48 Da | 29.84 | 87.12 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 419 | 685 | 2.76938E-88 | - |
| CDD | cd00054 | EGF_CA | 285 | 319 | 2.18536E-8 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 34 | 90 | 1.4E-8 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 415 | 682 | 2.4E-44 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 285 | 317 | 1.0E-6 | IPR001881 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 687 | 1.3E-73 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 285 | 319 | 6.86E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 387 | 488 | 1.3E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 706 | 8.1E-51 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 233 | 326 | 1.6E-12 | - |
| SMART | SM00179 | egfca_6 | 233 | 284 | 0.43 | IPR001881 |
| SMART | SM00179 | egfca_6 | 285 | 327 | 1.3E-8 | IPR001881 |
| SMART | SM00181 | egf_5 | 288 | 327 | 0.037 | IPR000742 |
| SMART | SM00220 | serkin_6 | 413 | 687 | 3.6E-31 | IPR000719 |
| SMART | SM00181 | egf_5 | 236 | 284 | 31.0 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 285 | 327 | 10.264133 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 413 | 696 | 36.400009 | IPR000719 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 301 | 312 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 285 | 310 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 535 | 547 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 419 | 442 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_037447727.1 | wall-associated receptor kinase 1-like [Triticum dicoccoides] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6NX71 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG056080.