Basic Information
Locus ID:
gene:TRIDC6AG054620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 593789754 | 593796229 | - | gene:TRIDC6AG054620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 79,129.57 Da | 33.51 | 86.70 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 331 | 418 | 1.7177E-24 | - |
| CDD | cd00028 | B_lectin | 29 | 149 | 4.04781E-27 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 225 | 318 | 5.7E-21 | IPR000858 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 502 | 696 | 3.4E-45 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 334 | 403 | 3.8E-16 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 71 | 175 | 1.4E-29 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 467 | 697 | 9.58E-73 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 57 | 192 | 7.07E-25 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 16 | 147 | 3.1E-20 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 457 | 573 | 5.6E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 708 | 5.9E-44 | - |
| SMART | SM00473 | ntp_6 | 335 | 417 | 2.3E-6 | IPR003609 |
| SMART | SM00108 | blect_4 | 27 | 149 | 1.3E-28 | IPR001480 |
| SMART | SM00220 | serkin_6 | 498 | 710 | 1.5E-17 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 712 | 1.7E-230 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 334 | 418 | 10.388349 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 21 | 147 | 18.374073 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 498 | 712 | 36.809895 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 504 | 526 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 619 | 631 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21390.2 | - | 0 |
| RefSeq | XP_047062047.1 | receptor-like serine/threonine-protein kinase SD1-7 [Lolium rigidum] | 0 |
| O81906 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K2CIS4 | Receptor-like serine/threonine-protein kinase OS=Brachypodium distachyon OX=15368 GN=100839365 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG054620.