Basic Information
Locus ID:
gene:TRIDC6AG054150
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 592396019 | 592400401 | - | gene:TRIDC6AG054150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 54,922.20 Da | 59.36 | 73.86 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 445 | 488 | 1.57054E-18 | - |
| Pfam | PF13639 | Ring finger domain | 445 | 488 | 6.9E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 432 | 492 | 4.59E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 406 | 493 | 4.9E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 446 | 487 | 1.9E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 446 | 488 | 12.813844 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 207 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 68 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45290.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037448775.1 | uncharacterized protein LOC119318332 [Triticum dicoccoides] | 0 |
| P0DPR2 | E3 ubiquitin-protein ligase RNF43 OS=Xenopus tropicalis OX=8364 GN=rnf43 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NVR6 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG054150.