Basic Information
Locus ID:
gene:TRIDC6AG054140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 592340075 | 592343708 | + | gene:TRIDC6AG054140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 76,398.21 Da | 34.22 | 91.52 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 280 | 313 | 2.72483E-7 | - |
| CDD | cd14066 | STKc_IRAK | 406 | 670 | 7.20841E-86 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 33 | 93 | 2.5E-13 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 403 | 667 | 2.5E-42 | IPR001245 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 279 | 315 | 5.59E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 381 | 671 | 2.56E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 474 | 682 | 2.1E-53 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 280 | 324 | 8.3E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 363 | 473 | 8.8E-26 | - |
| SMART | SM00220 | serkin_6 | 399 | 670 | 1.5E-29 | IPR000719 |
| SMART | SM00179 | egfca_6 | 280 | 322 | 4.0E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 399 | 670 | 35.368229 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 280 | 317 | 9.695218 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 280 | 305 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 296 | 307 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 518 | 530 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_037446354.1 | LOW QUALITY PROTEIN: wall-associated receptor kinase-like 3 [Triticum dicoccoides] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NVV5 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG054140.