Basic Information
Locus ID:
gene:TRIDC6AG053930
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 591749101 | 591757722 | - | gene:TRIDC6AG053930 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 159,075.05 Da | 49.07 | 88.02 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13980 | STKc_Vps15 | 58 | 304 | 1.32514E-140 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 1020 | 1055 | 6.5E-6 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 80 | 294 | 3.1E-20 | IPR000719 |
| SUPERFAMILY | SSF48371 | ARM repeat | 433 | 828 | 1.76E-32 | IPR016024 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 70 | 293 | 7.93E-34 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1017 | 1436 | 2.17E-30 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 970 | 1063 | 5.1E-8 | IPR015943 |
| Gene3D | G3DSA:1.25.10.10 | - | 633 | 830 | 9.8E-20 | IPR011989 |
| Gene3D | G3DSA:2.130.10.10 | - | 1230 | 1436 | 1.2E-8 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1064 | 1226 | 1.5E-8 | IPR015943 |
| Gene3D | G3DSA:1.25.10.10 | - | 412 | 603 | 2.7E-9 | IPR011989 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 110 | 299 | 3.2E-30 | - |
| SMART | SM00320 | WD40_4 | 1307 | 1341 | 77.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1066 | 1103 | 74.0 | IPR001680 |
| SMART | SM00220 | serkin_6 | 5 | 296 | 9.7E-9 | IPR000719 |
| SMART | SM00320 | WD40_4 | 1391 | 1436 | 0.53 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1164 | 1205 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1016 | 1055 | 2.9E-8 | IPR001680 |
| ProSiteProfiles | PS50077 | HEAT repeat profile. | 521 | 558 | 8.5502 | IPR021133 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1023 | 1057 | 11.840134 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1023 | 1057 | 14.318126 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 312 | 18.690107 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1403 | 1436 | 9.467419 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1423 | 1436 | 9.639578 | IPR001680 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 978 | 1001 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 968 | 1001 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29380.1 | protein kinase family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037448752.1 | serine/threonine-protein kinase VPS15-like [Triticum dicoccoides] | 0 |
| Q9M0E5 | Serine/threonine-protein kinase VPS15 OS=Arabidopsis thaliana OX=3702 GN=VPS15 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NVP6 | non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG053930.