Basic Information
Locus ID:
gene:TRIDC6AG053590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 588195351 | 588199739 | + | gene:TRIDC6AG053590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 67,699.32 Da | 45.74 | 70.84 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 21 | 325 | 1.88479E-162 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 23 | 324 | 3.2E-55 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 21 | 326 | 1.14E-90 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 18 | 338 | 4.9E-94 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 22 | 327 | 52.906601 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 23 | 38 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 269 | 287 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 512 | 537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 493 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57990.1 | ubiquitin-specific protease 23. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_044404798.1 | ubiquitin carboxyl-terminal hydrolase 23-like isoform X1 [Triticum aestivum] | 0 |
| Q9FPS4 | Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana OX=3702 GN=UBP23 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6NVL4 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG053590.