Basic Information
Locus ID:
gene:TRIDC6AG053080
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 585455896 | 585457917 | + | gene:TRIDC6AG053080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 74,767.04 Da | 32.55 | 91.53 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 267 | 4.94426E-79 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 356 | 624 | 1.51943E-93 | - |
| Pfam | PF00069 | Protein kinase domain | 351 | 620 | 1.1E-47 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 31 | 279 | 3.6E-65 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 331 | 640 | 2.46E-78 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 31 | 286 | 2.31E-60 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 631 | 4.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 336 | 426 | 1.1E-31 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 31 | 272 | 4.8E-52 | - |
| SMART | SM00220 | serkin_6 | 350 | 622 | 1.9E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 350 | 631 | 38.70385 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 473 | 485 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037448690.1 | uncharacterized protein LOC119318266 [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | M7YCL0 | L-type lectin-domain containing receptor kinase IV.1 OS=Triticum urartu OX=4572 GN=TRIUR3_03159 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG053080.