Basic Information
Locus ID:
gene:TRIDC6AG051980
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 579282776 | 579288530 | - | gene:TRIDC6AG051980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 121,550.49 Da | 50.69 | 66.62 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 24 | 121 | 1.82081E-33 | - |
| CDD | cd13999 | STKc_MAP3K-like | 832 | 1089 | 8.96044E-105 | - |
| Pfam | PF00564 | PB1 domain | 36 | 121 | 9.0E-16 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 827 | 1089 | 1.2E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 812 | 1088 | 9.69E-73 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 37 | 127 | 2.12E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 913 | 1099 | 6.5E-52 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 41 | 124 | 3.6E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 812 | 912 | 1.7E-23 | - |
| SMART | SM00666 | PB1_new | 35 | 121 | 6.0E-28 | IPR000270 |
| SMART | SM00220 | serkin_6 | 826 | 1096 | 8.4E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 826 | 1089 | 39.495354 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 832 | 853 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 951 | 963 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 908 | 921 | 7.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1016 | 1038 | 7.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 945 | 963 | 7.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1060 | 1082 | 7.7E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 693 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57610.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_037448620.1 | uncharacterized protein LOC119318202 [Triticum dicoccoides] | 0 |
| A0A2R6XIK6 | RAF-like serine/threonine-protein kinase PRAF OS=Marchantia polymorpha OX=3197 GN=PRAF PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NVW1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG051980.