halophFGD

Basic Information

Locus ID: gene:TRIDC6AG051800

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: Anaphase-promoting complex, cyclosome, subunit 4

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
6A	578168909	578177091	+	gene:TRIDC6AG051800

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.12	86,547.43 Da	46.59	93.70	-0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12896	Anaphase-promoting complex, cyclosome, subunit 4	270	471	5.7E-55	IPR024790
Pfam	PF12894	Anaphase-promoting complex subunit 4 WD40 domain	37	122	2.6E-26	IPR024977
SUPERFAMILY	SSF50978	WD40 repeat-like	26	250	2.85E-20	IPR036322
Gene3D	G3DSA:2.130.10.10	-	12	252	2.7E-15	IPR015943
SMART	SM00320	WD40_4	101	146	84.0	IPR001680
SMART	SM00320	WD40_4	60	98	0.0015	IPR001680

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K03351 (anaphase-promoting complex subunit 4)

Pathway:

ko04110 (Cell cycle) map04110 (Cell cycle) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04113 (Meiosis - yeast) map04113 (Meiosis - yeast) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) ko04120 (Ubiquitin mediated proteolysis) map04120 (Ubiquitin mediated proteolysis)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G21530.1	Transducin/WD40 repeat-like superfamily protein.
RefSeq	XP_037448610.1	anaphase-promoting complex subunit 4-like isoform X1 [Triticum dicoccoides]
Swiss-Prot	O65418	Anaphase-promoting complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=APC4 PE=2 SV=2
TrEMBL	A0A8R7UUM1	Anaphase-promoting complex subunit 4 OS=Triticum urartu OX=4572 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC6AG051800.