Basic Information
Locus ID:
gene:TRIDC6AG051200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 574285509 | 574290787 | - | gene:TRIDC6AG051200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 84,481.30 Da | 39.52 | 81.88 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 322 | 365 | 4.65791E-10 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 55 | 106 | 2.4E-10 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 457 | 707 | 7.1E-41 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 322 | 364 | 1.2E-9 | IPR001881 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 439 | 733 | 5.26E-67 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 316 | 365 | 2.57E-8 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 254 | 371 | 3.2E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 531 | 728 | 7.3E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 438 | 530 | 1.1E-25 | - |
| SMART | SM00181 | egf_5 | 325 | 365 | 1.1E-5 | IPR000742 |
| SMART | SM00181 | egf_5 | 270 | 321 | 18.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 456 | 732 | 1.8E-33 | IPR000719 |
| SMART | SM00179 | egfca_6 | 322 | 365 | 9.4E-11 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 456 | 719 | 34.548454 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 322 | 365 | 15.692732 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 575 | 587 | - | IPR008271 |
| ProSitePatterns | PS01186 | EGF-like domain signature 2. | 349 | 364 | - | IPR000742 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 340 | 351 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 322 | 349 | - | IPR018097 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_037448580.1 | wall-associated receptor kinase 2-like [Triticum dicoccoides] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NVS8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG051200.