Basic Information
Locus ID:
gene:TRIDC6AG050760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 571852638 | 571858304 | + | gene:TRIDC6AG050760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 70,608.28 Da | 46.23 | 74.91 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 517 | 630 | 2.1E-8 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 321 | 513 | 1.73E-25 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 517 | 632 | 1.66E-17 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 177 | 220 | 9.31E-6 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 175 | 231 | 5.7E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 482 | 639 | 3.6E-25 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 313 | 398 | 7.3E-7 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 87 | 129 | 9.269689 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 313 | 639 | 133.784927 | IPR030380 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 516 | 639 | 20.8218 | IPR001525 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 291 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_037448551.1 | DNA (cytosine-5)-methyltransferase DRM2-like isoform X1 [Triticum dicoccoides] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453PRF4 | SAM-dependent MTase DRM-type domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG050760.