Basic Information
Locus ID:
gene:TRIDC6AG050680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 571563118 | 571574459 | - | gene:TRIDC6AG050680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 63,347.60 Da | 39.95 | 84.65 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 245 | 496 | 7.7E-40 | IPR001245 |
| Pfam | PF04564 | U-box domain | 529 | 560 | 7.2E-6 | IPR003613 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 216 | 497 | 2.43E-63 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 517 | 561 | 1.59E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 521 | 561 | 9.9E-13 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 218 | 312 | 2.8E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 313 | 510 | 4.6E-44 | - |
| SMART | SM00220 | serkin_6 | 240 | 507 | 3.7E-23 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 528 | 561 | 19.701139 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 240 | 507 | 31.679253 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 358 | 370 | - | IPR008271 |
| Coils | Coil | Coil | 86 | 106 | - | - |
| Coils | Coil | Coil | 191 | 211 | - | - |
| Coils | Coil | Coil | 139 | 176 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037448549.1 | U-box domain-containing protein 70-like [Triticum dicoccoides] | 0 |
| Q5WA76 | U-box domain-containing protein 70 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB70 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453PSS6 | Serine/threonine-protein kinase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG050680.