Basic Information
Locus ID:
gene:TRIDC6AG049530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 562999067 | 563002049 | + | gene:TRIDC6AG049530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 94,461.90 Da | 45.17 | 85.01 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 343 | 427 | 4.38702E-10 | - |
| CDD | cd00028 | B_lectin | 53 | 161 | 2.46127E-16 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 541 | 826 | 3.63012E-84 | - |
| Pfam | PF00069 | Protein kinase domain | 539 | 817 | 1.5E-46 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 88 | 171 | 9.5E-15 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 517 | 825 | 2.7E-72 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 89 | 213 | 9.81E-18 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 611 | 836 | 2.9E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 508 | 610 | 2.3E-29 | - |
| Gene3D | G3DSA:2.90.10.30 | - | 51 | 175 | 1.2E-9 | - |
| SMART | SM00220 | serkin_6 | 535 | 824 | 1.8E-30 | IPR000719 |
| SMART | SM00108 | blect_4 | 47 | 161 | 4.5E-13 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 11 | 877 | 5.3E-180 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 343 | 428 | 7.90301 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 535 | 828 | 35.919453 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 41 | 159 | 9.154285 | IPR001480 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 541 | 564 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 655 | 667 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 759 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 490 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35370.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037448487.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Triticum dicoccoides] | 0 |
| O65238 | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana OX=3702 GN=At5g35370 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6NVE3 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG049530.