Basic Information
Locus ID:
gene:TRIDC6AG049490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 562755530 | 562756566 | - | gene:TRIDC6AG049490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 37,363.68 Da | 68.60 | 54.16 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16667 | RING-H2_RNF126_like | 198 | 240 | 1.96074E-25 | - |
| Pfam | PF13639 | Ring finger domain | 198 | 240 | 2.4E-12 | IPR001841 |
| Pfam | PF14369 | zinc-ribbon | 17 | 50 | 2.9E-10 | IPR039525 |
| SUPERFAMILY | SSF57850 | RING/U-box | 178 | 243 | 2.22E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 160 | 246 | 2.2E-23 | IPR013083 |
| SMART | SM00184 | ring_2 | 199 | 239 | 6.5E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 199 | 240 | 12.430266 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 272 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60360.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037448483.1 | E3 ubiquitin-protein ligase RING1-like [Triticum dicoccoides] | 0 |
| O22197 | Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PRD7 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG049490.