Basic Information
Locus ID:
gene:TRIDC6AG047260
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 550593969 | 550597605 | - | gene:TRIDC6AG047260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 96,998.59 Da | 37.23 | 107.16 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 439 | 491 | 1.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 167 | 226 | 8.4E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 606 | 867 | 3.8E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 588 | 870 | 2.05E-69 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 195 | 503 | 8.63E-58 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2 | 299 | 2.28E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 115 | 1.0E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 116 | 235 | 2.5E-33 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 564 | 681 | 3.5E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 236 | 526 | 5.8E-83 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 682 | 877 | 2.5E-47 | - |
| SMART | SM00369 | LRR_typ_2 | 69 | 93 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 117 | 141 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 454 | 477 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 165 | 188 | 9.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 333 | 357 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 212 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 381 | 405 | 5.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 21 | 45 | 79.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 604 | 874 | 36.032524 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 727 | 739 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 610 | 633 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037448320.1 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Triticum dicoccoides] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B6NV55 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG047260.