Basic Information
Locus ID:
gene:TRIDC6AG046130
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the cullin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 540501161 | 540505016 | + | gene:TRIDC6AG046130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 84,976.65 Da | 46.46 | 81.31 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00888 | Cullin family | 26 | 628 | 6.8E-226 | IPR001373 |
| Pfam | PF10557 | Cullin protein neddylation domain | 660 | 721 | 2.0E-24 | IPR019559 |
| SUPERFAMILY | SSF74788 | Cullin repeat-like | 19 | 369 | 6.8E-116 | IPR016159 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 642 | 730 | 1.28E-28 | IPR036390 |
| SUPERFAMILY | SSF75632 | Cullin homology domain | 365 | 638 | 1.15E-100 | IPR036317 |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 12 | 141 | 1.7E-42 | - |
| Gene3D | G3DSA:3.30.230.130 | Cullin; Chain C, Domain 2 | 487 | 641 | 1.6E-54 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 142 | 261 | 8.2E-39 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 262 | 369 | 4.1E-33 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 642 | 730 | 1.2E-32 | IPR036388 |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 370 | 483 | 2.6E-44 | - |
| SMART | SM00182 | cul_2 | 401 | 548 | 1.4E-71 | IPR016158 |
| SMART | SM00884 | Cullin_Nedd8_2 | 657 | 724 | 4.6E-35 | IPR019559 |
| ProSiteProfiles | PS50069 | Cullin family profile. | 371 | 599 | 56.695999 | IPR016158 |
| Coils | Coil | Coil | 222 | 242 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G26830.1 | cullin 3. Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal. | 0 |
| RefSeq | XP_037448253.1 | cullin-3A-like [Triticum dicoccoides] | 0 |
| Q9ZVH4 | Cullin-3A OS=Arabidopsis thaliana OX=3702 GN=CUL3A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NUW2 | CULLIN_2 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG046130.