Basic Information
Locus ID:
gene:TRIDC6AG043480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 518245236 | 518250958 | - | gene:TRIDC6AG043480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 50,291.92 Da | 26.72 | 64.29 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10313 | Uncharacterised protein domain (DUF2415) | 365 | 401 | 1.0E-4 | IPR019417 |
| Pfam | PF00400 | WD domain, G-beta repeat | 311 | 349 | 8.3E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 185 | 429 | 6.41E-34 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 168 | 442 | 7.8E-32 | IPR015943 |
| SMART | SM00320 | WD40_4 | 353 | 392 | 1.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 310 | 349 | 4.9E-8 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 317 | 358 | 13.816853 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 317 | 352 | 11.418318 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13340.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037448070.1 | uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9Y7K5 | Uncharacterized WD repeat-containing protein C2A9.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.03 PE=4 SV=2 | 0 | |
| TrEMBL | A0A3B6NU54 | DUF2415 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG043480.