Basic Information
Locus ID:
gene:TRIDC6AG043450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 517727740 | 517735459 | - | gene:TRIDC6AG043450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 54,667.99 Da | 28.96 | 65.89 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 346 | 384 | 2.5E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 153 | 464 | 1.83E-34 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 273 | 478 | 3.3E-30 | IPR015943 |
| SMART | SM00320 | WD40_4 | 304 | 342 | 63.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 431 | 476 | 480.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 345 | 384 | 5.9E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 388 | 427 | 3.5 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 352 | 387 | 10.943775 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 352 | 393 | 13.215325 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 98 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13340.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037448068.1 | uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6NRH3 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG043450.