Basic Information
Locus ID:
gene:TRIDC6AG042530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 506967164 | 506970526 | - | gene:TRIDC6AG042530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 79,311.87 Da | 33.32 | 86.39 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 51 | 305 | 4.41845E-74 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 386 | 661 | 4.8E-42 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 50 | 304 | 1.4E-54 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 362 | 664 | 1.14E-71 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 49 | 306 | 2.54E-55 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 465 | 669 | 4.6E-52 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 47 | 315 | 5.9E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 370 | 464 | 7.8E-28 | - |
| SMART | SM00220 | serkin_6 | 385 | 663 | 6.0E-36 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | 6.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 680 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 391 | 417 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 511 | 523 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06740.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037448013.1 | probable L-type lectin-domain containing receptor kinase S.5 [Triticum dicoccoides] | 0 |
| Q9FG33 | Probable L-type lectin-domain containing receptor kinase S.5 OS=Arabidopsis thaliana OX=3702 GN=LECRKS5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7UW33 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG042530.