Basic Information
Locus ID:
gene:TRIDC6AG041810
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 501361925 | 501365529 | + | gene:TRIDC6AG041810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 47,321.71 Da | 53.58 | 78.62 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01167 | Tub family | 131 | 424 | 3.7E-104 | IPR000007 |
| Pfam | PF00646 | F-box domain | 68 | 119 | 1.4E-8 | IPR001810 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 118 | 429 | 1.2E-94 | IPR025659 |
| SUPERFAMILY | SSF81383 | F-box domain | 61 | 112 | 8.63E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 67 | 113 | 1.2E-6 | - |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 127 | 429 | 7.4E-92 | IPR025659 |
| ProSitePatterns | PS01200 | Tub family signature 1. | 357 | 370 | - | IPR018066 |
| ProSitePatterns | PS01201 | Tub family signature 2. | 414 | 429 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 200 | 224 | 8.4E-70 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 386 | 405 | 8.4E-70 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 339 | 356 | 8.4E-70 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 248 | 275 | 8.4E-70 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 184 | 200 | 8.4E-70 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 407 | 429 | 8.4E-70 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 357 | 373 | 8.4E-70 | IPR000007 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 67 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G18280.1 | tubby like protein 2. Member of TLP family | 0 |
| RefSeq | XP_037447963.1 | tubby-like F-box protein 5 [Triticum dicoccoides] | 0 |
| Q6Z2G9 | Tubby-like F-box protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NTQ4 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG041810.