Basic Information
Locus ID:
gene:TRIDC6AG040840
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Multicopper oxidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 492789963 | 492790948 | - | gene:TRIDC6AG040840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.71 | 13,507.47 Da | 45.53 | 98.23 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 38 | 109 | 2.9E-34 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 30 | 111 | 7.88E-35 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 31 | 116 | 3.6E-46 | - |
| SMART | SM00213 | ubq_7 | 36 | 107 | 9.5E-35 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 36 | 111 | 30.256126 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 62 | 87 | - | IPR019954 |
| PRINTS | PR00348 | Ubiquitin signature | 67 | 87 | 2.5E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 88 | 109 | 2.5E-39 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 46 | 66 | 2.5E-39 | IPR019956 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36170.1 | Ubiquitin supergroup;Ribosomal protein L40e. | 0 |
| RefSeq | XP_047066029.1 | ubiquitin [Lolium rigidum] | 0 |
| P69310 | Ubiquitin OS=Avena sativa OX=4498 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Y1IF44 | 60S ribosomal protein L40 OS=Klebsormidium nitens OX=105231 GN=KFL_003450130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG040840.