Basic Information
Locus ID:
gene:TRIDC6AG040650
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 490918290 | 490923211 | + | gene:TRIDC6AG040650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 84,753.11 Da | 60.27 | 70.92 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 212 | 538 | 4.9E-48 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 210 | 540 | 1.31E-81 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 202 | 542 | 3.4E-84 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 211 | 541 | 49.77372 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 212 | 227 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 460 | 477 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 608 | 634 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 741 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 730 | 763 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 712 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 656 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 675 | 689 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46740.1 | ubiquitin-specific protease 21. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037447861.1 | ubiquitin carboxyl-terminal hydrolase 21-like [Triticum dicoccoides] | 0 |
| Q9FIQ1 | Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana OX=3702 GN=UBP21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NQT4 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG040650.