Basic Information
Locus ID:
gene:TRIDC6AG039880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
lysM domain receptor-like kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 482855506 | 482859661 | + | gene:TRIDC6AG039880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 70,082.29 Da | 38.80 | 91.02 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 190 | 219 | 3.43687E-4 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 385 | 624 | 1.5E-36 | IPR000719 |
| Pfam | PF01476 | LysM domain | 192 | 219 | 0.011 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 629 | 4.71E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 433 | 2.1E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 434 | 643 | 1.1E-49 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 178 | 237 | 3.0E-5 | IPR036779 |
| SMART | SM00220 | serkin_6 | 355 | 636 | 4.9E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 309 | 636 | 31.340038 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 479 | 491 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 247 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 333 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_037447798.1 | serine/threonine receptor-like kinase NFP [Triticum dicoccoides] | 0 |
| Q0GXS4 | Serine/threonine receptor-like kinase NFP OS=Medicago truncatula OX=3880 GN=NFP PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NS56 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG039880.