Basic Information
Locus ID:
gene:TRIDC6AG039550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
DWNN
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 480483916 | 480494372 | + | gene:TRIDC6AG039550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 103,595.56 Da | 71.73 | 52.04 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16620 | vRING-HC-C4C4_RBBP6 | 293 | 336 | 8.51056E-17 | - |
| Pfam | PF13696 | Zinc knuckle | 209 | 229 | 1.3E-9 | IPR025829 |
| Pfam | PF08783 | DWNN domain | 3 | 76 | 1.4E-30 | IPR014891 |
| SUPERFAMILY | SSF57850 | RING/U-box | 288 | 361 | 3.53E-12 | - |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 197 | 234 | 1.73E-5 | IPR036875 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 278 | 376 | 5.6E-13 | IPR013083 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 78 | 8.3E-33 | - |
| Gene3D | G3DSA:4.10.60.10 | - | 206 | 256 | 1.1E-16 | - |
| SMART | SM01180 | DWNN_2 | 3 | 76 | 3.2E-40 | IPR014891 |
| ProSiteProfiles | PS51282 | DWNN domain profile. | 3 | 76 | 31.432047 | IPR014891 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 746 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 422 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 931 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 910 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 467 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 911 | 931 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 675 | - | - |
| Coils | Coil | Coil | 618 | 638 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47430.4 | - | 0 |
| RefSeq | XP_037447770.1 | E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like isoform X1 [Triticum dicoccoides] | 0 |
| B9DFV2 | E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana OX=3702 GN=At5g47430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453P9S1 | DWNN domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG039550.