Basic Information
Locus ID:
gene:TRIDC6AG038550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 466207300 | 466211064 | - | gene:TRIDC6AG038550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 31,861.44 Da | 32.26 | 75.35 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 1 | 287 | 2.65172E-67 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 2 | 36 | 3.4E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 207 | 245 | 0.041 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 82 | 119 | 4.1E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 42 | 78 | 0.0027 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 253 | 287 | 1.1E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 2 | 287 | 9.89E-75 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 1 | 288 | 6.8E-75 | IPR015943 |
| SMART | SM00320 | WD40_4 | 205 | 246 | 3.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 39 | 78 | 2.8E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 125 | 162 | 0.48 | IPR001680 |
| SMART | SM00320 | WD40_4 | 166 | 202 | 3.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 249 | 288 | 3.7E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1 | 36 | 1.7E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 81 | 120 | 1.2E-7 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 256 | 288 | 13.922852 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 46 | 83 | 9.177421 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 46 | 87 | 12.17936 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 4 | 45 | 15.120162 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 88 | 120 | 9.810144 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 256 | 288 | 15.287253 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 88 | 120 | 11.744925 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 4 | 36 | 11.73468 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64730.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037447707.1 | WD repeat domain-containing protein 83 [Triticum dicoccoides] | 0 |
| Q9BRX9 | WD repeat domain-containing protein 83 OS=Homo sapiens OX=9606 GN=WDR83 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6AAV2 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG038550.