Basic Information
Locus ID:
gene:TRIDC6AG037910
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 458377904 | 458382340 | - | gene:TRIDC6AG037910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 77,951.43 Da | 49.41 | 81.92 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 2 | 130 | 1.85414E-31 | - |
| Pfam | PF00069 | Protein kinase domain | 461 | 670 | 8.1E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 434 | 668 | 2.83E-65 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 2 | 97 | 2.09E-6 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 1 | 125 | 1.3E-5 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 435 | 530 | 4.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 531 | 690 | 8.0E-45 | - |
| SMART | SM00220 | serkin_6 | 458 | 692 | 2.8E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 458 | 697 | 36.046661 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 576 | 588 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 464 | 485 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 173 | 212 | - | - |
| Coils | Coil | Coil | 357 | 433 | - | - |
| Coils | Coil | Coil | 315 | 335 | - | - |
| Coils | Coil | Coil | 291 | 311 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037447667.1 | U-box domain-containing protein 33-like [Triticum dicoccoides] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6NRP3 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG037910.