Basic Information
Locus ID:
gene:TRIDC6AG037730
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 457411899 | 457412354 | - | gene:TRIDC6AG037730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.52 | 15,814.96 Da | 48.85 | 92.45 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 88 | 130 | 1.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 79 | 136 | 8.54E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 52 | 133 | 3.7E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 88 | 129 | 2.7E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 88 | 130 | 11.176261 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 62 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11680.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_037445495.1 | E3 ubiquitin-protein ligase ATL23-like [Triticum dicoccoides] | 0 |
| Q6ZSG1 | E3 ubiquitin-protein ligase ARK2C OS=Homo sapiens OX=9606 GN=ARK2C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7UW55 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG037730.