Basic Information
Locus ID:
gene:TRIDC6AG036450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 447325214 | 447327248 | - | gene:TRIDC6AG036450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 74,306.78 Da | 41.65 | 94.18 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 36 | 276 | 2.44927E-85 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 365 | 629 | 3.47497E-89 | - |
| Pfam | PF00139 | Legume lectin domain | 35 | 287 | 1.2E-72 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 360 | 627 | 2.5E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 656 | 1.07E-79 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 296 | 9.79E-69 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 436 | 648 | 2.5E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 435 | 1.3E-32 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 34 | 280 | 2.2E-60 | - |
| SMART | SM00220 | serkin_6 | 359 | 629 | 8.8E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 635 | 38.039555 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 365 | 389 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 150 | 156 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 480 | 492 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037449710.1 | L-type lectin-domain containing receptor kinase SIT1-like [Triticum dicoccoides] | 0 |
| Q6H7D2 | L-type lectin-domain containing receptor kinase SIT1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7QSR2 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG036450.