Basic Information
Locus ID:
gene:TRIDC6AG036290
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 446778778 | 446784537 | + | gene:TRIDC6AG036290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 78,235.00 Da | 57.35 | 65.30 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 404 | 439 | 8.5E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 295 | 326 | 7.7E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 446 | 482 | 0.0044 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 290 | 565 | 2.02E-45 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 284 | 591 | 2.1E-51 | IPR015943 |
| SMART | SM00320 | WD40_4 | 443 | 482 | 4.0E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 288 | 327 | 6.6E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 485 | 523 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 402 | 440 | 9.7E-9 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 409 | 449 | 12.045688 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 295 | 328 | 12.367405 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 295 | 328 | 14.986489 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 409 | 443 | 9.651964 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 449 | 483 | 12.112524 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 449 | 483 | 10.100143 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 314 | 328 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 427 | 441 | 2.8E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 314 | 328 | 2.8E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 469 | 483 | 2.8E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 687 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 127 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 666 | 681 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037446246.1 | WD repeat-containing protein 44-like, partial [Triticum dicoccoides] | 0 |
| Q5JSH3 | WD repeat-containing protein 44 OS=Homo sapiens OX=9606 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NS04 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG036290.