Basic Information
Locus ID:
gene:TRIDC6AG035350
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 430459837 | 430470579 | + | gene:TRIDC6AG035350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 47,354.63 Da | 37.01 | 77.76 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 76 | 361 | 4.2E-30 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 72 | 360 | 3.53E-48 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 67 | 371 | 1.6E-51 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 75 | 371 | 29.359913 | IPR028889 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037447483.1 | ubiquitin carboxyl-terminal hydrolase 19-like isoform X1 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6NPE3 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG035350.