Basic Information
Locus ID:
gene:TRIDC6AG034550
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 418799339 | 418803853 | + | gene:TRIDC6AG034550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 121,450.90 Da | 31.85 | 106.11 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 429 | 450 | 1.1 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 835 | 1091 | 2.6E-37 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 671 | 729 | 1.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 600 | 657 | 8.6E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 96 | 131 | 1.5E-11 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 389 | 735 | 1.1E-67 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 95 | 463 | 5.67E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 818 | 1091 | 1.48E-64 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 378 | 469 | 2.8E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 254 | 377 | 1.0E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 798 | 915 | 7.1E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 916 | 1109 | 5.2E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 470 | 764 | 2.0E-89 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 94 | 253 | 3.9E-45 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 351 | 375 | 99.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 402 | 426 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 450 | 473 | 80.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 502 | 528 | 320.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 183 | 212 | 120.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 644 | 665 | 33.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 231 | 257 | 33.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 279 | 305 | 200.0 | - |
| SMART | SM00369 | LRR_typ_2 | 716 | 741 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 644 | 668 | 1.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 231 | 255 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 692 | 715 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 206 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 621 | 643 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 279 | 303 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 550 | 574 | 150.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 834 | 1095 | 4.8E-29 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 646 | 668 | 7.496336 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 623 | 645 | 8.158596 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 834 | 1101 | 34.449516 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 840 | 863 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 692 | 705 | 1.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 647 | 660 | 1.3E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 31 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037447415.1 | receptor kinase-like protein Xa21 [Triticum dicoccoides] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NRT0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG034550.