Basic Information
Locus ID:
gene:TRIDC6AG032210
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 374453468 | 374462470 | + | gene:TRIDC6AG032210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 46,338.04 Da | 38.72 | 96.54 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 1 | 161 | 6.94209E-69 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 311 | 405 | 3.1E-21 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 1 | 173 | 2.8E-49 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 218 | 405 | 7.11E-49 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 33 | 265 | 3.65E-51 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 314 | 408 | 9.9E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 171 | 1.9E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 230 | 313 | 8.3E-27 | - |
| SMART | SM00220 | serkin_6 | 244 | 405 | 1.8E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 244 | 408 | 21.926794 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 324 | 336 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_044419824.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum aestivum] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453NZ96 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG032210.