Basic Information
Locus ID:
gene:TRIDC6AG031880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 362200799 | 362209644 | - | gene:TRIDC6AG031880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 46,028.39 Da | 47.79 | 80.29 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02663 | Peptidase_C19G | 67 | 403 | 3.25058E-168 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 66 | 402 | 3.0E-59 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 63 | 405 | 2.78E-89 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 48 | 404 | 5.1E-104 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 66 | 405 | 60.703045 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 336 | 354 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 67 | 82 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G22310.1 | ubiquitin-specific protease 4. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037447228.1 | ubiquitin carboxyl-terminal hydrolase 4-like [Triticum dicoccoides] | 0 |
| Q8LAM0 | Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=UBP4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6NQ59 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG031880.