Basic Information
Locus ID:
gene:TRIDC6AG031500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 350037842 | 350045238 | + | gene:TRIDC6AG031500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 23,475.73 Da | 51.01 | 80.67 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 80 | 123 | 1.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 65 | 129 | 4.01E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 41 | 128 | 5.0E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 81 | 122 | 4.8E-7 | IPR001841 |
| SMART | SM00744 | ringv_2 | 80 | 123 | 0.0063 | IPR011016 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 81 | 123 | 13.256433 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10150.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_048534519.1 | RING-H2 finger protein ATL58-like [Triticum urartu] | 0 |
| Q9SN28 | RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7URY3 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG031500.