Basic Information
Locus ID:
gene:TRIDC6AG029580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
HEI10
Description:
E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 290884439 | 290889110 | + | gene:TRIDC6AG029580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 34,663.24 Da | 68.75 | 55.74 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14634 | zinc-RING finger domain | 2 | 43 | 1.2E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 2 | 50 | 2.42E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 76 | 1.4E-7 | IPR013083 |
| Gene3D | G3DSA:1.20.5.1000 | arf6 gtpase in complex with a specific effector, jip4 | 130 | 187 | 4.3E-5 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 3 | 42 | 8.56498 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 303 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 284 | - | - |
| Coils | Coil | Coil | 119 | 181 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53490.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037447092.1 | E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Triticum dicoccoides] | 0 |
| I6PL68 | E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=HEI10 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7URS6 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG029580.