Basic Information
Locus ID:
gene:TRIDC6AG028830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 266180570 | 266182417 | - | gene:TRIDC6AG028830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.72 | 45,340.76 Da | 39.90 | 80.47 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 328 | 359 | 0.028 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 223 | 254 | 0.091 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 83 | 363 | 7.63E-28 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 81 | 427 | 1.3E-34 | IPR015943 |
| SMART | SM00320 | WD40_4 | 216 | 254 | 3.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 168 | 213 | 0.34 | IPR001680 |
| SMART | SM00320 | WD40_4 | 319 | 359 | 5.3E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 326 | 362 | 10.441614 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 223 | 263 | 8.770704 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 326 | 362 | 8.781968 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 346 | 360 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12910.1 | Transducin/WD40 repeat-like superfamily protein. Encodes a protein with similarity to the petunia WD repeat protein an11. | 0 |
| RefSeq | XP_037447047.1 | WD repeat-containing protein LWD1-like [Triticum dicoccoides] | 0 |
| Q9LPV9 | WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7UV97 | WD repeat-containing protein LWD1 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG028830.