Basic Information
Locus ID:
gene:TRIDC6AG027740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Sigma factor PP2C-like phosphatases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 233778556 | 233800832 | - | gene:TRIDC6AG027740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 121,201.50 Da | 42.60 | 88.14 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00143 | PP2Cc | 121 | 395 | 8.94504E-57 | IPR001932 |
| CDD | cd00038 | CAP_ED | 487 | 597 | 5.71078E-23 | IPR000595 |
| CDD | cd00038 | CAP_ED | 614 | 740 | 3.31558E-12 | IPR000595 |
| Pfam | PF00027 | Cyclic nucleotide-binding domain | 506 | 598 | 2.3E-19 | IPR000595 |
| Pfam | PF00027 | Cyclic nucleotide-binding domain | 633 | 733 | 3.1E-8 | IPR000595 |
| Pfam | PF00069 | Protein kinase domain | 810 | 1030 | 1.9E-29 | IPR000719 |
| Pfam | PF00481 | Protein phosphatase 2C | 128 | 373 | 2.3E-36 | IPR001932 |
| SUPERFAMILY | SSF51206 | cAMP-binding domain-like | 452 | 598 | 1.83E-26 | IPR018490 |
| SUPERFAMILY | SSF81606 | PP2C-like | 87 | 397 | 2.49E-53 | IPR036457 |
| SUPERFAMILY | SSF51206 | cAMP-binding domain-like | 607 | 743 | 2.75E-17 | IPR018490 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 767 | 1065 | 8.95E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 861 | 1042 | 1.1E-56 | - |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 463 | 602 | 3.1E-31 | IPR014710 |
| Gene3D | G3DSA:3.60.40.10 | - | 101 | 396 | 5.2E-64 | IPR036457 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 605 | 749 | 4.1E-21 | IPR014710 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 775 | 860 | 1.1E-56 | - |
| SMART | SM00332 | PP2C_4 | 97 | 393 | 2.1E-56 | IPR001932 |
| SMART | SM00100 | cnmp_10 | 487 | 612 | 1.4E-12 | IPR000595 |
| SMART | SM00220 | serkin_6 | 795 | 1030 | 1.3E-21 | IPR000719 |
| SMART | SM00100 | cnmp_10 | 614 | 754 | 3.1E-7 | IPR000595 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 487 | 597 | 26.6658 | IPR000595 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 776 | 1030 | 25.347221 | IPR000719 |
| ProSiteProfiles | PS51746 | PPM-type phosphatase domain profile. | 105 | 395 | 41.310726 | IPR001932 |
| ProSiteProfiles | PS50042 | cAMP/cGMP binding motif profile. | 614 | 737 | 15.5302 | IPR000595 |
| ProSitePatterns | PS01032 | PPM-type phosphatase domain signature. | 141 | 149 | - | IPR000222 |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 523 | 537 | 2.7E-6 | - |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 559 | 568 | 2.7E-6 | - |
| PRINTS | PR00103 | cAMP-dependent protein kinase signature | 508 | 522 | 2.7E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 58 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20050.1 | protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases. | 0 |
| RefSeq | XP_037446983.1 | protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein-like isoform X2 [Triticum dicoccoides] | 0 |
| Q9SL76 | Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At2g20050/At2g20040 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6NN79 | protein-serine/threonine phosphatase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG027740.