HalophFGD

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Basic Information
Locus ID: gene:TRIDC6AG027410
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: phosphatase 2A 55 kDa regulatory subunit B'
Maps and Mapping Data
Chromosome Start End Strand ID
6A 223083738 223093534 - gene:TRIDC6AG027410
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.37 64,568.23 Da 54.70 71.99 -0.58
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00400 WD domain, G-beta repeat 291 327 0.17 IPR001680
SUPERFAMILY SSF50978 WD40 repeat-like 106 570 3.21E-34 IPR036322
Gene3D G3DSA:2.130.10.10 - 142 577 3.0E-27 IPR015943
SMART SM00320 WD40_4 98 133 7.2 IPR001680
SMART SM00320 WD40_4 338 378 17.0 IPR001680
SMART SM00320 WD40_4 171 211 58.0 IPR001680
SMART SM00320 WD40_4 288 327 0.94 IPR001680
SMART SM00320 WD40_4 439 493 94.0 IPR001680
SMART SM00320 WD40_4 397 435 290.0 IPR001680
PIRSF PIRSF037309 PPA2_B55 77 579 9.4E-192 IPR000009
ProSitePatterns PS01024 Protein phosphatase 2A regulatory subunit PR55 signature 1. 171 185 - IPR018067
ProSitePatterns PS01025 Protein phosphatase 2A regulatory subunit PR55 signature 2. 297 311 - IPR018067
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 548 577 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 384 411 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 187 215 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 327 354 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 299 326 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 412 439 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 466 492 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 355 383 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 158 186 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 112 132 5.1E-155 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 440 465 5.1E-155 IPR000009
MobiDBLite mobidb-lite consensus disorder prediction 36 57 - -
MobiDBLite mobidb-lite consensus disorder prediction 228 254 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding) GO:0019888 (protein phosphatase regulator activity)
Cellular Component:
GO:0000159 (protein phosphatase type 2A complex)
KEGG Pathway
KO Term:
K04354 (serine/threonine-protein phosphatase 2A regulatory subunit B)
Pathway:
ko03015 (mRNA surveillance pathway) map03015 (mRNA surveillance pathway) ko04071 (Sphingolipid signaling pathway) map04071 (Sphingolipid signaling pathway) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04390 (Hippo signaling pathway) map04390 (Hippo signaling pathway) ko04391 (Hippo signaling pathway - fly) map04391 (Hippo signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B 0
RefSeq XP_044419564.1 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 [Triticum aestivum] 0
Swiss-Prot A2X2K3 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006296 PE=2 SV=2 0
TrEMBL A0A453NUM0 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC6AG027410.

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