Basic Information
Locus ID:
gene:TRIDC6AG023660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 166349244 | 166357147 | - | gene:TRIDC6AG023660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 83,145.06 Da | 46.13 | 90.33 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 96 | 112 | 0.14 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 178 | 6.1E-11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 431 | 697 | 2.9E-28 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 248 | 5.67E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 704 | 6.32E-57 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 394 | 506 | 5.6E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 263 | 1.9E-44 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 507 | 729 | 1.2E-42 | - |
| SMART | SM00369 | LRR_typ_2 | 96 | 120 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 0.51 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 429 | 709 | 29.629824 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 144 | 165 | 7.427029 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 435 | 458 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 285 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 0 |
| RefSeq | XP_037446693.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like isoform X1 [Triticum dicoccoides] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453NMM9 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG023660.