Basic Information
Locus ID:
gene:TRIDC6AG020890
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
VID27 cytoplasmic protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 133657005 | 133660311 | + | gene:TRIDC6AG020890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 74,252.32 Da | 37.18 | 70.76 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08553 | VID27 C-terminal WD40-like domain | 311 | 627 | 4.6E-44 | IPR013863 |
| SUPERFAMILY | SSF101908 | Putative isomerase YbhE | 306 | 540 | 8.24E-11 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 376 | 683 | 3.1E-7 | IPR015943 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 84 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33400.1 | Vacuolar import/degradation, Vid27-related protein. | 0 |
| RefSeq | XP_037446493.1 | protein CYPRO4-like [Triticum dicoccoides] | 0 |
| P40781 | Protein CYPRO4 OS=Cynara cardunculus OX=4265 GN=CYPRO4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NLP2 | VID27 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG020890.