Basic Information
Locus ID:
gene:TRIDC6AG020380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 127796658 | 127799507 | + | gene:TRIDC6AG020380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 43,050.30 Da | 55.82 | 91.80 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01088 | Ubiquitin carboxyl-terminal hydrolase, family 1 | 52 | 251 | 2.2E-60 | IPR001578 |
| Pfam | PF18031 | Ubiquitin carboxyl-terminal hydrolases | 315 | 360 | 3.9E-19 | IPR041507 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 51 | 269 | 1.34E-61 | IPR038765 |
| Gene3D | G3DSA:3.40.532.10 | - | 48 | 270 | 3.7E-74 | IPR036959 |
| Gene3D | G3DSA:1.20.58.860 | - | 271 | 354 | 1.8E-26 | - |
| PIRSF | PIRSF038120 | Uch | 47 | 377 | 6.2E-107 | IPR017390 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 198 | 209 | 9.7E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 54 | 71 | 9.7E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 125 | 142 | 9.7E-10 | IPR001578 |
| PRINTS | PR00707 | Ubiquitin C-terminal hydrolase (C12) family signature | 214 | 224 | 9.7E-10 | IPR001578 |
| Coils | Coil | Coil | 308 | 335 | - | - |
| Coils | Coil | Coil | 264 | 291 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65650.1 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1. | 0 |
| RefSeq | XP_037446468.1 | ubiquitin carboxyl-terminal hydrolase 2-like [Triticum dicoccoides] | 0 |
| O04482 | Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana OX=3702 GN=UCH2 PE=1 SV=1 | 0 | |
| TrEMBL | M8CGZ5 | Ubiquitin carboxyl-terminal hydrolase OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG020380.