Basic Information
Locus ID:
gene:TRIDC6AG018570
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain of unknown function (DUF4704)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 108082566 | 108112695 | - | gene:TRIDC6AG018570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 219,948.86 Da | 45.75 | 91.61 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06071 | Beach | 1311 | 1586 | 6.0381E-148 | IPR000409 |
| CDD | cd01201 | PH_BEACH | 1127 | 1275 | 1.46467E-21 | IPR023362 |
| Pfam | PF15787 | Domain of unknown function (DUF4704) | 119 | 386 | 1.2E-74 | IPR031570 |
| Pfam | PF14844 | PH domain associated with Beige/BEACH | 1133 | 1269 | 6.3E-15 | IPR023362 |
| Pfam | PF02138 | Beige/BEACH domain | 1310 | 1586 | 5.1E-120 | IPR000409 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1721 | 1757 | 2.9E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1786 | 1819 | 0.003 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 1690 | 1953 | 1.4E-39 | IPR036322 |
| SUPERFAMILY | SSF81837 | BEACH domain | 1293 | 1586 | 1.2E-123 | IPR036372 |
| SUPERFAMILY | SSF50729 | PH domain-like | 1126 | 1274 | 4.3E-19 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 1125 | 1269 | 4.3E-20 | IPR011993 |
| Gene3D | G3DSA:2.130.10.10 | - | 1612 | 1871 | 6.2E-27 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 1872 | 1964 | 2.9E-6 | IPR015943 |
| Gene3D | G3DSA:1.10.1540.10 | BEACH domain | 1299 | 1586 | 3.0E-135 | IPR036372 |
| SMART | SM01026 | Beach_2 | 1308 | 1586 | 1.4E-196 | IPR000409 |
| SMART | SM00320 | WD40_4 | 1868 | 1906 | 60.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1826 | 1866 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1909 | 1947 | 0.43 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1719 | 1758 | 1.3E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1784 | 1823 | 0.02 | IPR001680 |
| ProSiteProfiles | PS51783 | BEACH-type PH domain profile. | 1122 | 1272 | 27.240602 | IPR023362 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1726 | 1757 | 10.996502 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1726 | 1757 | 13.248743 | IPR001680 |
| ProSiteProfiles | PS50197 | BEACH domain profile. | 1296 | 1586 | 119.966026 | IPR000409 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1069 | 1123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1067 | 1123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1184 | 1213 | - | - |
| Coils | Coil | Coil | 903 | 937 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58230.2 | - | 0 |
| RefSeq | XP_037445939.1 | BEACH domain-containing protein B-like isoform X1 [Triticum dicoccoides] | 0 |
| F4I9T0 | BEACH domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=BCHB PE=4 SV=1 | 0 | |
| TrEMBL | A0A8R7UV42 | BEACH domain-containing protein lvsC OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG018570.