Basic Information
Locus ID:
gene:TRIDC6AG016710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 6A | 97791261 | 97794453 | - | gene:TRIDC6AG016710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 115,961.69 Da | 35.44 | 98.99 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 777 | 1041 | 7.61814E-87 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 77 | 1.4E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 474 | 524 | 1.1E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 772 | 1038 | 2.3E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 267 | 311 | 1.5E-6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 347 | 667 | 1.49E-49 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 87 | 434 | 2.28E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 758 | 1041 | 5.13E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 344 | 676 | 2.4E-90 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 847 | 1056 | 6.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 173 | 1.2E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 270 | 343 | 9.9E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 732 | 846 | 4.0E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 269 | 1.5E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 226 | 250 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 299 | 323 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 472 | 496 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 396 | 417 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 625 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 348 | 372 | 190.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 771 | 1050 | 2.2E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 275 | 298 | 400.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 771 | 1050 | 35.650906 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 894 | 906 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 777 | 800 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 106 | 119 | 6.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 601 | 614 | 6.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 0 |
| RefSeq | XP_037445863.1 | tyrosine-sulfated glycopeptide receptor 1-like [Triticum dicoccoides] | 0 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NKS8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC6AG016710.